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Acute Myeloid Leukemia (AML) and Negative Staging Marrow (NSM) CODEX Segmentation Masks

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posted on 2024-04-12, 20:21 authored by Shovik BandyopadhyayShovik Bandyopadhyay, Jonathan SussmanJonathan Sussman, Kyung Jin AhnKyung Jin Ahn, Kai TanKai Tan

Whole cell segmentation masks for CODEX images using Mesmer. DAPI was used for the nuclear channel and a merged membrane channel consisting of Vimentin, CD45, and NaK-ATPase was used.

See related materials in Collection at: https://doi.org/10.25452/figshare.plus.c.7174914

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Research Institution(s)

Children's Hospital of Philadelphia

Contact email

tank1@chop.edu

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Competing Interest Statement

The authors declare no competing interests.

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    Keywords

    Bone marrowCODEXSpatial proteomicsHemtatopoiesisStromal cells

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