IBS001_concordance.tar.gz (1.4 MB)

GLIMPSE and loimpute Validation Concordance Files

dataset

posted on 2022-12-16, 03:13 authored by Renato SantosRenato Santos, Manuel CorpasManuel Corpas

This dataset contains the concordance metrics files, compared between high and low-coverage VCF files, of an IBS (Iberian Populations in Spain) genome, sequenced at 30X coverage on both Illumina and MGI platforms, imputed using GLIMPSE, and loimpute using Gencove's SaaS (Software as a Service). These files were produced using GLIMPSE.

See related materials at: https://doi.org/10.25452/figshare.plus.c.6347534

History

Research Institution(s)

BGI Genomics; University of Westminster

Contact email

M.Corpas@westminster.ac.uk

I confirm there is no human personally identifiable information in the files or description shared

I confirm the files and description shared may be publicly distributed under the license selected

Competing Interest Statement

RS is an employee of BGI Genomics UK Co. Ltd. MC is associated with Cambridge Precision Medicine Ltd.

Usage metrics

Figshare+

Keywords

Whole genome sequence data low coverage whole genome sequencing Low coverage whole genome sequencing (LC WGS)low coverage genome sequencing low coverage imputation GLIMPSE loimpute Pearson r values Pearson correlation coefficients Genomics Gene Expression (incl. Microarray and other genome-wide approaches)

Licence

CC BY 4.0