Quality-filtered soil shotgun metagenomes
Soil shotgun metagenomic data. We analyzed 1451 sets of publicly reusable shotgun metagenomic data from soil. The raw fastq sequences underwent merging of paired-end reads, trimming of low quality regions, and further quality filtering. This item provides the quality-filtered metagenomic sequences that are ready to be reused.
Because of the huge data size, the sequence files are grouped into 300 batches in this item. Each batch consists of one to several dozens of metagenomic data sets. Each file has been compressed using MFCompress (https://doi.org/10.1093/bioinformatics/btt594). Users are expected to decompress them using MFCompress.
Funding
Studies on nitrogen fixation of iron reducing bacteria as a key process of sustainable nitrogen fertility in paddy soil : towards low nitrogen agriculture
Japan Society for the Promotion of Science
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Japan Society for the Promotion of Science
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Japan Society for the Promotion of Science
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Japan Society for the Promotion of Science
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Japan Society for the Promotion of Science
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Japan Science and Technology Agency
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New Energy and Industrial Technology Development Organization
Find out more...History
Research Institution(s)
National Institute of Advanced Industrial Science and Technology; The University of TokyoContact email
mise-33@aist.go.jpAssociated Preprint DOI
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