Source Code for "Low-coverage whole genome sequencing for a highly selective cohort of severe COVID-19 patients"

software

posted on 2024-05-13, 21:54 authored by Renato SantosRenato Santos, Manuel CorpasManuel Corpas

This dataset contains the bash and python scripts, and ancilliary files, used to perform low-coverage imputation, concordance validation, and principal component analysis, of the validation IBS (Iberian Populations in Spain) genome, and the severe COVID-19 low-coverage whole genome sequence samples.

See related materials at: https://doi.org/10.25452/figshare.plus.c.6347534

History

Research Institution(s)

University of Westminster; Imperial College London

Contact email

M.Corpas@westminster.ac.uk

I confirm there is no human personally identifiable information in the files or description shared

I confirm the files and description shared may be publicly distributed under the license selected

Competing Interest Statement

MC is associated with Cambridge Precision Medicine Ltd.

Usage metrics

Keywords

low coverage imputation GWAS GWAS studies bioinformatic analysis GLIMPSE loimpute Low coverage whole genome sequencing (LC WGS)low coverage genome sequencing low coverage whole genome sequencing Bioinformatics Genomics Gene Expression (incl. Microarray and other genome-wide approaches)

Licence

MIT