GLIMPSE-low-coverage-WGS-imputation.zip (9.16 kB)

GLIMPSE imputation pipeline scripts

software

posted on 2023-02-21, 23:25 authored by Renato SantosRenato Santos, Manuel CorpasManuel Corpas

This dataset contains the bash and python scripts used to perform low-coverage imputation and concordance measuring, using GLIMPSE, of both the validation IBS (Iberian Populations in Spain) genome, and the clinical severe Covid-19 clinical low-coverage whole genome sequence samples.

See related materials at:

https://doi.org/10.25452/figshare.plus.c.6347534

History

Research Institution(s)

BGI Genomics; University of Westminster

Contact email

M.Corpas@westminster.ac.uk

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Competing Interest Statement

RS is an employee of BGI Genomics UK Co. Ltd. MC is associated with Cambridge Precision Medicine Ltd.

Usage metrics

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Keywords

low coverage imputation GWAS GWAS studies bioinformatic analysis GLIMPSE loimpute Low coverage whole genome sequencing (LC WGS)low coverage genome sequencing low coverage whole genome sequencing Bioinformatics Genomics Gene Expression (incl. Microarray and other genome-wide approaches)

Licence

MIT